Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm16198-201ENSMUST00000118766 670 ntBASIC12.51□□□□□ -0.41
Lmo4P61969 Gm13365-201ENSMUST00000121188 973 ntBASIC12.51□□□□□ -0.41
Lmo4P61969 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lmo4P61969 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lmo4P61969 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.51□□□□□ -0.41
Lmo4P61969 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.51□□□□□ -0.41
Lmo4P61969 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Lmo4P61969 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.51□□□□□ -0.41
Lmo4P61969 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.51□□□□□ -0.41
Lmo4P61969 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lmo4P61969 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Gm15920-201ENSMUST00000118998 402 ntBASIC12.5□□□□□ -0.41
Lmo4P61969 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.5□□□□□ -0.41
Lmo4P61969 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.5□□□□□ -0.41
Lmo4P61969 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Lmo4P61969 Rpph1-201ENSMUST00000175096 319 ntBASIC12.5□□□□□ -0.41
Lmo4P61969 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lmo4P61969 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lmo4P61969 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lmo4P61969 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.5□□□□□ -0.41
Lmo4P61969 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Lmo4P61969 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.5□□□□□ -0.41
Lmo4P61969 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Lmo4P61969 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lmo4P61969 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lmo4P61969 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.5□□□□□ -0.41
Lmo4P61969 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lmo4P61969 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lmo4P61969 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.49□□□□□ -0.41
Lmo4P61969 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Lmo4P61969 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Lmo4P61969 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.49□□□□□ -0.41
Lmo4P61969 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lmo4P61969 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lmo4P61969 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.49□□□□□ -0.41
Lmo4P61969 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.49□□□□□ -0.41
Lmo4P61969 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.49□□□□□ -0.41
Lmo4P61969 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.49□□□□□ -0.41
Lmo4P61969 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.49□□□□□ -0.41
Lmo4P61969 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lmo4P61969 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lmo4P61969 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lmo4P61969 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.48□□□□□ -0.41
Lmo4P61969 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.48□□□□□ -0.41
Lmo4P61969 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.48□□□□□ -0.41
Lmo4P61969 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Gm11745-201ENSMUST00000121669 448 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms