Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp25P57080 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Usp25P57080 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Usp25P57080 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Usp25P57080 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp25P57080 Gm10052-201ENSMUST00000168019 960 ntBASIC17.6■□□□□ 0.41
Usp25P57080 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.6■□□□□ 0.41
Usp25P57080 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Usp25P57080 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Gm7729-201ENSMUST00000050143 801 ntBASIC17.6■□□□□ 0.41
Usp25P57080 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.6■□□□□ 0.41
Usp25P57080 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Usp25P57080 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.6■□□□□ 0.41
Usp25P57080 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp25P57080 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp25P57080 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp25P57080 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.59■□□□□ 0.41
Usp25P57080 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp25P57080 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp25P57080 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp25P57080 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp25P57080 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp25P57080 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.59■□□□□ 0.41
Usp25P57080 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp25P57080 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.59■□□□□ 0.41
Usp25P57080 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp25P57080 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp25P57080 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.59■□□□□ 0.41
Usp25P57080 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp25P57080 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp25P57080 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.59■□□□□ 0.41
Usp25P57080 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Usp25P57080 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp25P57080 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Usp25P57080 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Usp25P57080 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp25P57080 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Usp25P57080 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Usp25P57080 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp25P57080 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp25P57080 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Usp25P57080 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp25P57080 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.58■□□□□ 0.4
Usp25P57080 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp25P57080 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
Usp25P57080 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp25P57080 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.58■□□□□ 0.4
Usp25P57080 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp25P57080 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp25P57080 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
Usp25P57080 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp25P57080 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp25P57080 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp25P57080 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Usp25P57080 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Usp25P57080 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp25P57080 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Usp25P57080 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp25P57080 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp25P57080 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp25P57080 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.58■□□□□ 0.4
Usp25P57080 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp25P57080 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp25P57080 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Usp25P57080 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Usp25P57080 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Usp25P57080 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp25P57080 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.57■□□□□ 0.4
Usp25P57080 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp25P57080 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.57■□□□□ 0.4
Usp25P57080 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Usp25P57080 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp25P57080 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp25P57080 Mir7071-201ENSMUST00000184847 69 ntBASIC17.57■□□□□ 0.4
Usp25P57080 Gm7367-201ENSMUST00000057611 492 ntBASIC17.57■□□□□ 0.4
Usp25P57080 Gm9987-201ENSMUST00000069768 567 ntBASIC17.57■□□□□ 0.4
Usp25P57080 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Usp25P57080 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.57■□□□□ 0.4
Usp25P57080 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp25P57080 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Usp25P57080 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp25P57080 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp25P57080 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms