Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdh11P55288 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cdh11P55288 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.17□□□□□ -0.14
Cdh11P55288 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdh11P55288 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdh11P55288 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Cdh11P55288 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cdh11P55288 Gm29707-201ENSMUST00000196325 491 ntBASIC14.17□□□□□ -0.14
Cdh11P55288 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cdh11P55288 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cdh11P55288 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdh11P55288 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh11P55288 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.17□□□□□ -0.14
Cdh11P55288 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cdh11P55288 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cdh11P55288 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh11P55288 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh11P55288 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh11P55288 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh11P55288 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Cdh11P55288 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdh11P55288 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh11P55288 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Cdh11P55288 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh11P55288 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh11P55288 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh11P55288 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdh11P55288 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cdh11P55288 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdh11P55288 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdh11P55288 Gm44450-201ENSMUST00000199528 114 ntBASIC14.16□□□□□ -0.14
Cdh11P55288 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.16□□□□□ -0.14
Cdh11P55288 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Cdh11P55288 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.16□□□□□ -0.14
Cdh11P55288 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh11P55288 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdh11P55288 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh11P55288 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh11P55288 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh11P55288 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh11P55288 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.16□□□□□ -0.14
Cdh11P55288 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdh11P55288 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cdh11P55288 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Cdh11P55288 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.15□□□□□ -0.14
Cdh11P55288 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cdh11P55288 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Cdh11P55288 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.15□□□□□ -0.14
Cdh11P55288 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdh11P55288 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms