Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.88□□□□□ -0.03
Cdkn2bP55271 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.88□□□□□ -0.03
Cdkn2bP55271 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkn2bP55271 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Gm15794-201ENSMUST00000120182 631 ntBASIC14.87□□□□□ -0.03
Cdkn2bP55271 Gm11950-201ENSMUST00000121615 838 ntBASIC14.87□□□□□ -0.03
Cdkn2bP55271 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdkn2bP55271 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Efs-202ENSMUST00000227037 2540 ntBASIC14.87□□□□□ -0.03
Cdkn2bP55271 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cdkn2bP55271 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.86□□□□□ -0.03
Cdkn2bP55271 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Gm45328-201ENSMUST00000210942 917 ntBASIC14.86□□□□□ -0.03
Cdkn2bP55271 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkn2bP55271 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cdkn2bP55271 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdkn2bP55271 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdkn2bP55271 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cdkn2bP55271 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdkn2bP55271 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdkn2bP55271 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdkn2bP55271 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdkn2bP55271 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdkn2bP55271 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdkn2bP55271 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdkn2bP55271 Gm14722-201ENSMUST00000118943 689 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms