Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-6P43688 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-6P43688 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-6P43688 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-6P43688 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-6P43688 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-6P43688 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-6P43688 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.67□□□□□ -0.06
Nkx2-6P43688 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Nkx2-6P43688 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Gm9682-201ENSMUST00000197505 556 ntBASIC14.67□□□□□ -0.06
Nkx2-6P43688 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.67□□□□□ -0.06
Nkx2-6P43688 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Nkx2-6P43688 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.67□□□□□ -0.06
Nkx2-6P43688 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.67□□□□□ -0.06
Nkx2-6P43688 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-6P43688 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-6P43688 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.66□□□□□ -0.06
Nkx2-6P43688 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-6P43688 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.66□□□□□ -0.06
Nkx2-6P43688 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nkx2-6P43688 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.66□□□□□ -0.06
Nkx2-6P43688 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-6P43688 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.66□□□□□ -0.06
Nkx2-6P43688 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-6P43688 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.65□□□□□ -0.06
Nkx2-6P43688 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.65□□□□□ -0.06
Nkx2-6P43688 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx2-6P43688 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms