Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf4P43488 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.01□□□□□ -0.01
Tnfsf4P43488 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf4P43488 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf4P43488 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf4P43488 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf4P43488 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf4P43488 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf4P43488 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.01□□□□□ -0.01
Tnfsf4P43488 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf4P43488 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf4P43488 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Tnfsf4P43488 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15□□□□□ -0.01
Tnfsf4P43488 Gm44443-201ENSMUST00000204396 5633 ntBASIC15□□□□□ -0.01
Tnfsf4P43488 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Tnfsf4P43488 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15□□□□□ -0.01
Tnfsf4P43488 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Gm8349-201ENSMUST00000182720 1003 ntBASIC15□□□□□ -0.01
Tnfsf4P43488 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15□□□□□ -0.01
Tnfsf4P43488 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15□□□□□ -0.01
Tnfsf4P43488 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15□□□□□ -0.01
Tnfsf4P43488 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15□□□□□ -0.01
Tnfsf4P43488 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15□□□□□ -0.01
Tnfsf4P43488 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15□□□□□ -0.01
Tnfsf4P43488 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Tnfsf4P43488 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf4P43488 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Gm13312-201ENSMUST00000119631 718 ntBASIC14.99□□□□□ -0.01
Tnfsf4P43488 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Tnfsf4P43488 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.99□□□□□ -0.01
Tnfsf4P43488 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.98□□□□□ -0.01
Tnfsf4P43488 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.98□□□□□ -0.01
Tnfsf4P43488 Gm15794-201ENSMUST00000120182 631 ntBASIC14.98□□□□□ -0.01
Tnfsf4P43488 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Gm17808-201ENSMUST00000200859 894 ntBASIC14.98□□□□□ -0.01
Tnfsf4P43488 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf4P43488 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tnfsf4P43488 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Tnfsf4P43488 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tnfsf4P43488 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms