Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HttP42859 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HttP42859 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
HttP42859 Gm8062-201ENSMUST00000139696 444 ntBASIC16.38■□□□□ 0.21
HttP42859 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HttP42859 Gm15823-201ENSMUST00000064305 670 ntBASIC16.38■□□□□ 0.21
HttP42859 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HttP42859 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
HttP42859 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HttP42859 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.38■□□□□ 0.21
HttP42859 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HttP42859 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HttP42859 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HttP42859 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HttP42859 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.38■□□□□ 0.21
HttP42859 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HttP42859 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.37■□□□□ 0.21
HttP42859 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.37■□□□□ 0.21
HttP42859 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.37■□□□□ 0.21
HttP42859 Mir1982-201ENSMUST00000157368 74 ntBASIC16.37■□□□□ 0.21
HttP42859 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.37■□□□□ 0.21
HttP42859 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HttP42859 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.37■□□□□ 0.21
HttP42859 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HttP42859 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HttP42859 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HttP42859 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HttP42859 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.37■□□□□ 0.21
HttP42859 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.37■□□□□ 0.21
HttP42859 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HttP42859 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HttP42859 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HttP42859 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HttP42859 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.36■□□□□ 0.21
HttP42859 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HttP42859 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HttP42859 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HttP42859 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HttP42859 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HttP42859 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HttP42859 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HttP42859 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.36■□□□□ 0.21
HttP42859 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.36■□□□□ 0.21
HttP42859 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HttP42859 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HttP42859 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HttP42859 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.36■□□□□ 0.21
HttP42859 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HttP42859 Gm10478-201ENSMUST00000084451 396 ntBASIC16.36■□□□□ 0.21
HttP42859 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HttP42859 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HttP42859 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HttP42859 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.36■□□□□ 0.21
HttP42859 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.35■□□□□ 0.21
HttP42859 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HttP42859 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HttP42859 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.35■□□□□ 0.21
HttP42859 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HttP42859 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
HttP42859 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
HttP42859 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HttP42859 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
HttP42859 Gm38241-201ENSMUST00000192641 898 ntBASIC16.35■□□□□ 0.21
HttP42859 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.35■□□□□ 0.21
HttP42859 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.35■□□□□ 0.21
HttP42859 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HttP42859 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HttP42859 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HttP42859 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.35■□□□□ 0.21
HttP42859 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HttP42859 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.35■□□□□ 0.21
HttP42859 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.35■□□□□ 0.21
HttP42859 Gm12091-201ENSMUST00000146791 830 ntBASIC16.35■□□□□ 0.21
HttP42859 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.35■□□□□ 0.21
HttP42859 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HttP42859 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HttP42859 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.34■□□□□ 0.21
HttP42859 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.34■□□□□ 0.21
HttP42859 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
HttP42859 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.34■□□□□ 0.21
HttP42859 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HttP42859 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.34■□□□□ 0.21
HttP42859 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.34■□□□□ 0.21
HttP42859 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.34■□□□□ 0.21
HttP42859 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HttP42859 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HttP42859 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms