Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.31□□□□□ -0.12
Cd40lgP27548 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40lgP27548 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40lgP27548 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40lgP27548 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.31□□□□□ -0.12
Cd40lgP27548 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cd40lgP27548 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40lgP27548 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40lgP27548 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40lgP27548 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Cd40lgP27548 Mir6404-201ENSMUST00000183699 94 ntBASIC14.31□□□□□ -0.12
Cd40lgP27548 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40lgP27548 Gm5864-201ENSMUST00000202263 970 ntBASIC14.31□□□□□ -0.12
Cd40lgP27548 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40lgP27548 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cd40lgP27548 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40lgP27548 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40lgP27548 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.31□□□□□ -0.12
Cd40lgP27548 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40lgP27548 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.31□□□□□ -0.12
Cd40lgP27548 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Cd40lgP27548 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40lgP27548 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40lgP27548 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40lgP27548 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40lgP27548 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cd40lgP27548 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cd40lgP27548 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40lgP27548 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40lgP27548 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cd40lgP27548 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40lgP27548 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40lgP27548 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cd40lgP27548 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40lgP27548 Gm12497-201ENSMUST00000138778 237 ntBASIC14.3□□□□□ -0.12
Cd40lgP27548 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.3□□□□□ -0.12
Cd40lgP27548 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.3□□□□□ -0.12
Cd40lgP27548 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cd40lgP27548 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40lgP27548 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40lgP27548 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40lgP27548 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cd40lgP27548 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.3□□□□□ -0.12
Cd40lgP27548 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cd40lgP27548 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.3□□□□□ -0.12
Cd40lgP27548 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cd40lgP27548 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Cd40lgP27548 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Gm25406-201ENSMUST00000157599 105 ntBASIC14.29□□□□□ -0.12
Cd40lgP27548 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.29□□□□□ -0.12
Cd40lgP27548 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.29□□□□□ -0.12
Cd40lgP27548 Gm18195-201ENSMUST00000207604 706 ntBASIC14.29□□□□□ -0.12
Cd40lgP27548 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.29□□□□□ -0.12
Cd40lgP27548 Gm7461-201ENSMUST00000058918 827 ntBASIC14.29□□□□□ -0.12
Cd40lgP27548 Rps4l-201ENSMUST00000071745 943 ntBASIC14.29□□□□□ -0.12
Cd40lgP27548 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cd40lgP27548 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cd40lgP27548 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cd40lgP27548 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Cd40lgP27548 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cd40lgP27548 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40lgP27548 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Cd40lgP27548 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Gm11452-201ENSMUST00000122376 690 ntBASIC14.28□□□□□ -0.12
Cd40lgP27548 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.28□□□□□ -0.12
Cd40lgP27548 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cd40lgP27548 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Cd40lgP27548 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Gm6376-201ENSMUST00000209407 580 ntBASIC14.28□□□□□ -0.12
Cd40lgP27548 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.28□□□□□ -0.12
Cd40lgP27548 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.28□□□□□ -0.12
Cd40lgP27548 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40lgP27548 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms