Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clk1P22518 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Clk1P22518 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clk1P22518 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.48□□□□□ -0.09
Clk1P22518 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Clk1P22518 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Clk1P22518 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clk1P22518 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clk1P22518 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clk1P22518 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clk1P22518 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clk1P22518 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Clk1P22518 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Clk1P22518 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.47□□□□□ -0.09
Clk1P22518 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Clk1P22518 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.47□□□□□ -0.09
Clk1P22518 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Clk1P22518 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Clk1P22518 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Clk1P22518 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Clk1P22518 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk1P22518 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.46□□□□□ -0.09
Clk1P22518 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Clk1P22518 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Clk1P22518 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.46□□□□□ -0.09
Clk1P22518 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.46□□□□□ -0.09
Clk1P22518 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.46□□□□□ -0.09
Clk1P22518 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.46□□□□□ -0.09
Clk1P22518 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Clk1P22518 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk1P22518 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.46□□□□□ -0.09
Clk1P22518 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk1P22518 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk1P22518 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Clk1P22518 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.45□□□□□ -0.1
Clk1P22518 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.45□□□□□ -0.1
Clk1P22518 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clk1P22518 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Clk1P22518 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.45□□□□□ -0.1
Clk1P22518 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Clk1P22518 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Clk1P22518 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Clk1P22518 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Clk1P22518 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.45□□□□□ -0.1
Clk1P22518 Gm9172-201ENSMUST00000212092 954 ntBASIC14.45□□□□□ -0.1
Clk1P22518 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk1P22518 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms