Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a2P08122 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.31□□□□□ -0.12
Col4a2P08122 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.31□□□□□ -0.12
Col4a2P08122 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.31□□□□□ -0.12
Col4a2P08122 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.31□□□□□ -0.12
Col4a2P08122 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.31□□□□□ -0.12
Col4a2P08122 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.31□□□□□ -0.12
Col4a2P08122 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.31□□□□□ -0.12
Col4a2P08122 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.31□□□□□ -0.12
Col4a2P08122 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a2P08122 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col4a2P08122 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Col4a2P08122 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.3□□□□□ -0.12
Col4a2P08122 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.3□□□□□ -0.12
Col4a2P08122 Mir6977-201ENSMUST00000184960 64 ntBASIC14.3□□□□□ -0.12
Col4a2P08122 Gm38294-201ENSMUST00000192831 381 ntBASIC14.3□□□□□ -0.12
Col4a2P08122 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.3□□□□□ -0.12
Col4a2P08122 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col4a2P08122 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.3□□□□□ -0.12
Col4a2P08122 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.3□□□□□ -0.12
Col4a2P08122 Asic1-205ENSMUST00000228185 1818 ntBASIC14.3□□□□□ -0.12
Col4a2P08122 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col4a2P08122 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Col4a2P08122 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a2P08122 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.29□□□□□ -0.12
Col4a2P08122 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.29□□□□□ -0.12
Col4a2P08122 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.29□□□□□ -0.12
Col4a2P08122 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col4a2P08122 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col4a2P08122 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col4a2P08122 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.29□□□□□ -0.12
Col4a2P08122 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a2P08122 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Col4a2P08122 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.29□□□□□ -0.12
Col4a2P08122 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a2P08122 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a2P08122 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Col4a2P08122 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.28□□□□□ -0.12
Col4a2P08122 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.28□□□□□ -0.12
Col4a2P08122 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.28□□□□□ -0.12
Col4a2P08122 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.28□□□□□ -0.12
Col4a2P08122 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.28□□□□□ -0.12
Col4a2P08122 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a2P08122 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a2P08122 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.28□□□□□ -0.12
Col4a2P08122 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Col4a2P08122 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms