Protein–RNA interactions for Protein: O88967

Yme1l1, ATP-dependent zinc metalloprotease YME1L1, mousemouse

Known RBP Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yme1l1O88967 Gm27359-201ENSMUST00000184153 110 ntBASIC16.21■□□□□ 0.19
Yme1l1O88967 Gm27785-201ENSMUST00000184268 110 ntBASIC16.21■□□□□ 0.19
Yme1l1O88967 Gm27466-201ENSMUST00000184396 110 ntBASIC16.21■□□□□ 0.19
Yme1l1O88967 Gm27703-201ENSMUST00000184836 110 ntBASIC16.21■□□□□ 0.19
Yme1l1O88967 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.21■□□□□ 0.19
Yme1l1O88967 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.21■□□□□ 0.19
Yme1l1O88967 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.21■□□□□ 0.19
Yme1l1O88967 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.21■□□□□ 0.19
Yme1l1O88967 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.21■□□□□ 0.19
Yme1l1O88967 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Yme1l1O88967 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.21■□□□□ 0.19
Yme1l1O88967 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.21■□□□□ 0.19
Yme1l1O88967 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Yme1l1O88967 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Yme1l1O88967 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Yme1l1O88967 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Yme1l1O88967 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Yme1l1O88967 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Yme1l1O88967 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.2■□□□□ 0.18
Yme1l1O88967 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Yme1l1O88967 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Yme1l1O88967 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.2■□□□□ 0.18
Yme1l1O88967 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.2■□□□□ 0.18
Yme1l1O88967 Mir6977-201ENSMUST00000184960 64 ntBASIC16.2■□□□□ 0.18
Yme1l1O88967 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.2■□□□□ 0.18
Yme1l1O88967 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Yme1l1O88967 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Yme1l1O88967 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Yme1l1O88967 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Yme1l1O88967 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Yme1l1O88967 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Yme1l1O88967 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Yme1l1O88967 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Yme1l1O88967 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.19■□□□□ 0.18
Yme1l1O88967 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Yme1l1O88967 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Yme1l1O88967 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.19■□□□□ 0.18
Yme1l1O88967 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.19■□□□□ 0.18
Yme1l1O88967 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.19■□□□□ 0.18
Yme1l1O88967 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.19■□□□□ 0.18
Yme1l1O88967 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.19■□□□□ 0.18
Yme1l1O88967 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Yme1l1O88967 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.19■□□□□ 0.18
Yme1l1O88967 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.19■□□□□ 0.18
Yme1l1O88967 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.19■□□□□ 0.18
Yme1l1O88967 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Yme1l1O88967 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.19■□□□□ 0.18
Yme1l1O88967 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.19■□□□□ 0.18
Yme1l1O88967 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Yme1l1O88967 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Yme1l1O88967 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.19■□□□□ 0.18
Yme1l1O88967 Gm10154-201ENSMUST00000084445 354 ntBASIC16.19■□□□□ 0.18
Yme1l1O88967 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Yme1l1O88967 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Yme1l1O88967 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Yme1l1O88967 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Yme1l1O88967 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Yme1l1O88967 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Yme1l1O88967 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Yme1l1O88967 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.19■□□□□ 0.18
Yme1l1O88967 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Yme1l1O88967 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.19■□□□□ 0.18
Yme1l1O88967 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Yme1l1O88967 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Gm12428-201ENSMUST00000119844 727 ntBASIC16.18■□□□□ 0.18
Yme1l1O88967 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Gm8318-201ENSMUST00000182954 872 ntBASIC16.18■□□□□ 0.18
Yme1l1O88967 Gm2272-201ENSMUST00000194903 582 ntBASIC16.18■□□□□ 0.18
Yme1l1O88967 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.18■□□□□ 0.18
Yme1l1O88967 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Yme1l1O88967 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Yme1l1O88967 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Yme1l1O88967 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms