Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hdac3O88895 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hdac3O88895 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hdac3O88895 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hdac3O88895 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hdac3O88895 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.92□□□□□ -0.18
Hdac3O88895 Gm33142-201ENSMUST00000193913 867 ntBASIC13.92□□□□□ -0.18
Hdac3O88895 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hdac3O88895 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.92□□□□□ -0.18
Hdac3O88895 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hdac3O88895 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hdac3O88895 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hdac3O88895 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hdac3O88895 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hdac3O88895 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hdac3O88895 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hdac3O88895 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.92□□□□□ -0.18
Hdac3O88895 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Hdac3O88895 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hdac3O88895 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.91□□□□□ -0.18
Hdac3O88895 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.91□□□□□ -0.18
Hdac3O88895 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.91□□□□□ -0.18
Hdac3O88895 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.91□□□□□ -0.18
Hdac3O88895 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Rprl3-201ENSMUST00000157400 290 ntBASIC13.91□□□□□ -0.18
Hdac3O88895 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.91□□□□□ -0.18
Hdac3O88895 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.91□□□□□ -0.18
Hdac3O88895 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Hdac3O88895 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Hdac3O88895 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hdac3O88895 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hdac3O88895 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.91□□□□□ -0.18
Hdac3O88895 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.9□□□□□ -0.18
Hdac3O88895 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.9□□□□□ -0.18
Hdac3O88895 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.9□□□□□ -0.18
Hdac3O88895 Mir6404-201ENSMUST00000183699 94 ntBASIC13.9□□□□□ -0.18
Hdac3O88895 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.9□□□□□ -0.18
Hdac3O88895 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Hdac3O88895 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Hdac3O88895 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hdac3O88895 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hdac3O88895 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.89□□□□□ -0.19
Hdac3O88895 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms