Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cops3O88543 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cops3O88543 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops3O88543 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.93□□□□□ -0.18
Cops3O88543 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops3O88543 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.93□□□□□ -0.18
Cops3O88543 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops3O88543 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.93□□□□□ -0.18
Cops3O88543 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.93□□□□□ -0.18
Cops3O88543 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops3O88543 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops3O88543 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cops3O88543 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cops3O88543 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops3O88543 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.93□□□□□ -0.18
Cops3O88543 Gm6257-201ENSMUST00000163864 910 ntBASIC13.93□□□□□ -0.18
Cops3O88543 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cops3O88543 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cops3O88543 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cops3O88543 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops3O88543 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops3O88543 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops3O88543 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops3O88543 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops3O88543 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.92□□□□□ -0.18
Cops3O88543 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.92□□□□□ -0.18
Cops3O88543 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Cops3O88543 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Cops3O88543 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.92□□□□□ -0.18
Cops3O88543 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.92□□□□□ -0.18
Cops3O88543 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cops3O88543 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops3O88543 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cops3O88543 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.91□□□□□ -0.18
Cops3O88543 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops3O88543 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Cops3O88543 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cops3O88543 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops3O88543 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.91□□□□□ -0.18
Cops3O88543 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops3O88543 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cops3O88543 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops3O88543 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.91□□□□□ -0.18
Cops3O88543 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops3O88543 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops3O88543 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops3O88543 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops3O88543 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops3O88543 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cops3O88543 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cops3O88543 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops3O88543 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.91□□□□□ -0.18
Cops3O88543 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cops3O88543 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cops3O88543 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cops3O88543 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops3O88543 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cops3O88543 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops3O88543 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.9□□□□□ -0.18
Cops3O88543 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops3O88543 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.9□□□□□ -0.18
Cops3O88543 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.9□□□□□ -0.18
Cops3O88543 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops3O88543 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cops3O88543 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cops3O88543 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cops3O88543 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cops3O88543 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms