Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp8O70138 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Mmp8O70138 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.9■□□□□ 0.62
Mmp8O70138 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.9■□□□□ 0.62
Mmp8O70138 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp8O70138 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.9■□□□□ 0.62
Mmp8O70138 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Mmp8O70138 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Mmp8O70138 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.9■□□□□ 0.62
Mmp8O70138 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp8O70138 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp8O70138 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp8O70138 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Mmp8O70138 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp8O70138 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp8O70138 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp8O70138 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp8O70138 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Mmp8O70138 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Mmp8O70138 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Mmp8O70138 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Mmp8O70138 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.89■□□□□ 0.61
Mmp8O70138 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Mmp8O70138 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Mmp8O70138 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.89■□□□□ 0.61
Mmp8O70138 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.89■□□□□ 0.61
Mmp8O70138 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.89■□□□□ 0.61
Mmp8O70138 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Gm4899-201ENSMUST00000178708 719 ntBASIC18.89■□□□□ 0.61
Mmp8O70138 Gm27628-201ENSMUST00000184911 107 ntBASIC18.89■□□□□ 0.61
Mmp8O70138 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.89■□□□□ 0.61
Mmp8O70138 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.89■□□□□ 0.61
Mmp8O70138 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Mmp8O70138 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.89■□□□□ 0.61
Mmp8O70138 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Mmp8O70138 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp8O70138 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.89■□□□□ 0.61
Mmp8O70138 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.88■□□□□ 0.61
Mmp8O70138 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.88■□□□□ 0.61
Mmp8O70138 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.88■□□□□ 0.61
Mmp8O70138 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.88■□□□□ 0.61
Mmp8O70138 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Mmp8O70138 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Mmp8O70138 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Mmp8O70138 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp8O70138 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp8O70138 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp8O70138 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp8O70138 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Mmp8O70138 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.87■□□□□ 0.61
Mmp8O70138 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.87■□□□□ 0.61
Mmp8O70138 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.87■□□□□ 0.61
Mmp8O70138 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.87■□□□□ 0.61
Mmp8O70138 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp8O70138 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp8O70138 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp8O70138 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp8O70138 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.87■□□□□ 0.61
Mmp8O70138 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.87■□□□□ 0.61
Mmp8O70138 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.87■□□□□ 0.61
Mmp8O70138 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp8O70138 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Mmp8O70138 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp8O70138 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp8O70138 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Mmp8O70138 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms