Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
BckdkO55028 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.41□□□□□ -0.1
BckdkO55028 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.41□□□□□ -0.1
BckdkO55028 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.41□□□□□ -0.1
BckdkO55028 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.41□□□□□ -0.1
BckdkO55028 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.41□□□□□ -0.1
BckdkO55028 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
BckdkO55028 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
BckdkO55028 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.41□□□□□ -0.1
BckdkO55028 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
BckdkO55028 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
BckdkO55028 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 App-207ENSMUST00000227737 2827 ntBASIC14.41□□□□□ -0.1
BckdkO55028 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BckdkO55028 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BckdkO55028 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.4□□□□□ -0.1
BckdkO55028 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BckdkO55028 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
BckdkO55028 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
BckdkO55028 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BckdkO55028 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.4□□□□□ -0.1
BckdkO55028 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BckdkO55028 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BckdkO55028 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BckdkO55028 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
BckdkO55028 Gm7862-201ENSMUST00000121461 292 ntBASIC14.4□□□□□ -0.1
BckdkO55028 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.4□□□□□ -0.1
BckdkO55028 Gm25745-201ENSMUST00000174945 133 ntBASIC14.4□□□□□ -0.1
BckdkO55028 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.4□□□□□ -0.1
BckdkO55028 Gm36967-201ENSMUST00000193814 266 ntBASIC14.4□□□□□ -0.1
BckdkO55028 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.4□□□□□ -0.1
BckdkO55028 Gm6296-201ENSMUST00000222599 943 ntBASIC14.4□□□□□ -0.1
BckdkO55028 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.4□□□□□ -0.1
BckdkO55028 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BckdkO55028 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BckdkO55028 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BckdkO55028 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BckdkO55028 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.4□□□□□ -0.1
BckdkO55028 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BckdkO55028 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
BckdkO55028 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BckdkO55028 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
BckdkO55028 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
BckdkO55028 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
BckdkO55028 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
BckdkO55028 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.39□□□□□ -0.11
BckdkO55028 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
BckdkO55028 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.39□□□□□ -0.11
BckdkO55028 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.39□□□□□ -0.11
BckdkO55028 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
BckdkO55028 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BckdkO55028 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.38□□□□□ -0.11
BckdkO55028 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.38□□□□□ -0.11
BckdkO55028 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms