Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Capn1O35350 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Capn1O35350 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Capn1O35350 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Capn1O35350 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Capn1O35350 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Capn1O35350 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Capn1O35350 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Capn1O35350 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.38□□□□□ -0.11
Capn1O35350 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Gm37935-201ENSMUST00000192012 982 ntBASIC14.38□□□□□ -0.11
Capn1O35350 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Gm8655-201ENSMUST00000221159 852 ntBASIC14.38□□□□□ -0.11
Capn1O35350 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.38□□□□□ -0.11
Capn1O35350 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Capn1O35350 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Capn1O35350 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.38□□□□□ -0.11
Capn1O35350 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Capn1O35350 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.38□□□□□ -0.11
Capn1O35350 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Capn1O35350 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Capn1O35350 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Capn1O35350 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capn1O35350 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Capn1O35350 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Capn1O35350 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capn1O35350 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capn1O35350 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.37□□□□□ -0.11
Capn1O35350 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capn1O35350 Gm15173-201ENSMUST00000122049 433 ntBASIC14.37□□□□□ -0.11
Capn1O35350 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
Capn1O35350 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Capn1O35350 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capn1O35350 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capn1O35350 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Capn1O35350 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.37□□□□□ -0.11
Capn1O35350 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Capn1O35350 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Capn1O35350 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capn1O35350 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Capn1O35350 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capn1O35350 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capn1O35350 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Capn1O35350 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Capn1O35350 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.36□□□□□ -0.11
Capn1O35350 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.36□□□□□ -0.11
Capn1O35350 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.36□□□□□ -0.11
Capn1O35350 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.36□□□□□ -0.11
Capn1O35350 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.36□□□□□ -0.11
Capn1O35350 Mir6404-201ENSMUST00000183699 94 ntBASIC14.36□□□□□ -0.11
Capn1O35350 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Psmb5-202ENSMUST00000227257 622 ntBASIC14.36□□□□□ -0.11
Capn1O35350 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.36□□□□□ -0.11
Capn1O35350 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.36□□□□□ -0.11
Capn1O35350 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.36□□□□□ -0.11
Capn1O35350 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Capn1O35350 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.36□□□□□ -0.11
Capn1O35350 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.36□□□□□ -0.11
Capn1O35350 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Capn1O35350 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms