Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ebf3O08791 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Ebf3O08791 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Ebf3O08791 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.12■□□□□ 0.17
Ebf3O08791 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.11■□□□□ 0.17
Ebf3O08791 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.11■□□□□ 0.17
Ebf3O08791 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.11■□□□□ 0.17
Ebf3O08791 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Mir8117-201ENSMUST00000184773 107 ntBASIC16.11■□□□□ 0.17
Ebf3O08791 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.11■□□□□ 0.17
Ebf3O08791 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.11■□□□□ 0.17
Ebf3O08791 Gm45167-201ENSMUST00000208007 322 ntBASIC16.11■□□□□ 0.17
Ebf3O08791 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ebf3O08791 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.11■□□□□ 0.17
Ebf3O08791 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ebf3O08791 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.11■□□□□ 0.17
Ebf3O08791 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ebf3O08791 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.11■□□□□ 0.17
Ebf3O08791 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf3O08791 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ebf3O08791 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.1■□□□□ 0.17
Ebf3O08791 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ebf3O08791 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ebf3O08791 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.1■□□□□ 0.17
Ebf3O08791 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.1■□□□□ 0.17
Ebf3O08791 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.1■□□□□ 0.17
Ebf3O08791 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.1■□□□□ 0.17
Ebf3O08791 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.1■□□□□ 0.17
Ebf3O08791 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.1■□□□□ 0.17
Ebf3O08791 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ebf3O08791 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ebf3O08791 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Ebf3O08791 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ebf3O08791 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.09■□□□□ 0.17
Ebf3O08791 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.09■□□□□ 0.17
Ebf3O08791 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.09■□□□□ 0.17
Ebf3O08791 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Gm26308-201ENSMUST00000157768 69 ntBASIC16.09■□□□□ 0.17
Ebf3O08791 Gm37153-201ENSMUST00000193637 231 ntBASIC16.09■□□□□ 0.17
Ebf3O08791 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ebf3O08791 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ebf3O08791 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms