Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Tnfrsf11bO08712 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Gm15165-201ENSMUST00000118140 502 ntBASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Gm27704-201ENSMUST00000185094 107 ntBASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11bO08712 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf11bO08712 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf11bO08712 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf11bO08712 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf11bO08712 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Gm25745-201ENSMUST00000174945 133 ntBASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf11bO08712 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms