Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3139J3QK78 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Gm3139J3QK78 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3139J3QK78 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3139J3QK78 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Gm3139J3QK78 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Gm3139J3QK78 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Gm3139J3QK78 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Gm3139J3QK78 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Gm3139J3QK78 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.45■□□□□ 0.06
Gm3139J3QK78 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Gm8318-201ENSMUST00000182954 872 ntBASIC15.45■□□□□ 0.06
Gm3139J3QK78 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.45■□□□□ 0.06
Gm3139J3QK78 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3139J3QK78 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.44■□□□□ 0.06
Gm3139J3QK78 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3139J3QK78 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.44■□□□□ 0.06
Gm3139J3QK78 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3139J3QK78 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.43■□□□□ 0.06
Gm3139J3QK78 Gm9727-201ENSMUST00000161387 555 ntBASIC15.43■□□□□ 0.06
Gm3139J3QK78 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.43■□□□□ 0.06
Gm3139J3QK78 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm3139J3QK78 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.42■□□□□ 0.06
Gm3139J3QK78 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Gm12260-201ENSMUST00000122447 411 ntBASIC15.42■□□□□ 0.06
Gm3139J3QK78 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Gm8000-201ENSMUST00000188378 592 ntBASIC15.42■□□□□ 0.06
Gm3139J3QK78 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.42■□□□□ 0.06
Gm3139J3QK78 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3139J3QK78 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms