Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh11xF6ZNL5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Gm15358-201ENSMUST00000119249 520 ntBASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Gm18733-201ENSMUST00000173950 856 ntBASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh11xF6ZNL5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Gm11452-201ENSMUST00000122376 690 ntBASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Gm43514-201ENSMUST00000198852 424 ntBASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Gm6443-201ENSMUST00000203599 874 ntBASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh11xF6ZNL5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh11xF6ZNL5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdh11xF6ZNL5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms