Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc149F6V035 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc149F6V035 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc149F6V035 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc149F6V035 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc149F6V035 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc149F6V035 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc149F6V035 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc149F6V035 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc149F6V035 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc149F6V035 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.72■□□□□ 0.11
Ccdc149F6V035 Grk6-207ENSMUST00000225925 2769 ntBASIC15.72■□□□□ 0.11
Ccdc149F6V035 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.72■□□□□ 0.11
Ccdc149F6V035 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.72■□□□□ 0.11
Ccdc149F6V035 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Gm44492-201ENSMUST00000197012 141 ntBASIC15.72■□□□□ 0.11
Ccdc149F6V035 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.72■□□□□ 0.11
Ccdc149F6V035 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.72■□□□□ 0.11
Ccdc149F6V035 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc149F6V035 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.71■□□□□ 0.11
Ccdc149F6V035 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.71■□□□□ 0.11
Ccdc149F6V035 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc149F6V035 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc149F6V035 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc149F6V035 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc149F6V035 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Gm13597-201ENSMUST00000121239 375 ntBASIC15.7■□□□□ 0.1
Ccdc149F6V035 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc149F6V035 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.7■□□□□ 0.1
Ccdc149F6V035 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ccdc149F6V035 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.7■□□□□ 0.1
Ccdc149F6V035 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccdc149F6V035 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc149F6V035 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc149F6V035 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc149F6V035 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc149F6V035 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc149F6V035 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms