Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb9E9Q5G2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb9E9Q5G2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb9E9Q5G2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhb9E9Q5G2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Gm12260-201ENSMUST00000122447 411 ntBASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms