Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Gm9299-201ENSMUST00000206392 1140 ntBASIC8.58□□□□□ -1.04
Herc1E9PZP8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Herc1E9PZP8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Herc1E9PZP8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Gm40466-201ENSMUST00000212174 422 ntBASIC8.58□□□□□ -1.04
Herc1E9PZP8 Gm8959-201ENSMUST00000213150 571 ntBASIC8.58□□□□□ -1.04
Herc1E9PZP8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Gm11814-201ENSMUST00000119515 929 ntBASIC8.57□□□□□ -1.04
Herc1E9PZP8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Gm7390-201ENSMUST00000212452 1216 ntBASIC8.57□□□□□ -1.04
Herc1E9PZP8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC8.57□□□□□ -1.04
Herc1E9PZP8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Abhd11os-203ENSMUST00000222613 363 ntBASIC8.57□□□□□ -1.04
Herc1E9PZP8 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Gm37194-201ENSMUST00000193092 3031 ntBASIC8.57□□□□□ -1.04
Herc1E9PZP8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 CT030182.1-201ENSMUST00000225935 533 ntBASIC8.57□□□□□ -1.04
Herc1E9PZP8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Herc1E9PZP8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Mir433-201ENSMUST00000093564 124 ntBASIC8.56□□□□□ -1.04
Herc1E9PZP8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Gm4819-201ENSMUST00000182170 1009 ntBASIC8.56□□□□□ -1.04
Herc1E9PZP8 Gm38002-201ENSMUST00000193255 180 ntBASIC8.56□□□□□ -1.04
Herc1E9PZP8 Gm8285-201ENSMUST00000208293 759 ntBASIC8.56□□□□□ -1.04
Herc1E9PZP8 Gm8463-201ENSMUST00000208573 613 ntBASIC8.56□□□□□ -1.04
Herc1E9PZP8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Gm16499-203ENSMUST00000204633 2177 ntBASIC8.56□□□□□ -1.04
Herc1E9PZP8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms