Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh17E9PXF0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh17E9PXF0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.46□□□□□ -0.1
Pcdh17E9PXF0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pcdh17E9PXF0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh17E9PXF0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pcdh17E9PXF0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Pcdh17E9PXF0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Gm27702-201ENSMUST00000184512 56 ntBASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh17E9PXF0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Gm4995-201ENSMUST00000117247 432 ntBASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh17E9PXF0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh17E9PXF0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms