Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hfm1D3Z4R1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hfm1D3Z4R1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Hfm1D3Z4R1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.57■■□□□ 1.04
Hfm1D3Z4R1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hfm1D3Z4R1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hfm1D3Z4R1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
Hfm1D3Z4R1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hfm1D3Z4R1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Hfm1D3Z4R1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hfm1D3Z4R1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hfm1D3Z4R1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC21.56■■□□□ 1.04
Hfm1D3Z4R1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hfm1D3Z4R1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hfm1D3Z4R1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hfm1D3Z4R1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hfm1D3Z4R1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 Gm18187-201ENSMUST00000196476 984 ntBASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 Gm12859-201ENSMUST00000117834 427 ntBASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hfm1D3Z4R1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Gm6912-201ENSMUST00000117218 544 ntBASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Gm9719-201ENSMUST00000162765 543 ntBASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Gm29667-201ENSMUST00000190817 490 ntBASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Gm43433-201ENSMUST00000196573 481 ntBASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Cdk7-205ENSMUST00000225990 1159 ntBASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hfm1D3Z4R1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hfm1D3Z4R1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hfm1D3Z4R1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hfm1D3Z4R1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hfm1D3Z4R1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hfm1D3Z4R1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hfm1D3Z4R1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Hfm1D3Z4R1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hfm1D3Z4R1 Gm14928-201ENSMUST00000120198 477 ntBASIC21.53■■□□□ 1.04
Hfm1D3Z4R1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC21.53■■□□□ 1.04
Hfm1D3Z4R1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hfm1D3Z4R1 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hfm1D3Z4R1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Hfm1D3Z4R1 Gm6263-201ENSMUST00000120029 1342 ntBASIC21.52■■□□□ 1.04
Hfm1D3Z4R1 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hfm1D3Z4R1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hfm1D3Z4R1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hfm1D3Z4R1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Hfm1D3Z4R1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hfm1D3Z4R1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Hfm1D3Z4R1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hfm1D3Z4R1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Hfm1D3Z4R1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Hfm1D3Z4R1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hfm1D3Z4R1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hfm1D3Z4R1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
Hfm1D3Z4R1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Gm24543-201ENSMUST00000103867 82 ntBASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Gm15222-202ENSMUST00000228667 1726 ntBASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Hfm1D3Z4R1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Asic1-205ENSMUST00000228185 1818 ntBASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Gm22189-201ENSMUST00000103822 86 ntBASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Gm15593-201ENSMUST00000122085 1008 ntBASIC21.5■■□□□ 1.03
Hfm1D3Z4R1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms