Protein–RNA interactions for Protein: D3YZP9

Ccdc6, Coiled-coil domain-containing protein 6, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc6D3YZP9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc6D3YZP9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc6D3YZP9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc6D3YZP9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Gm12329-201ENSMUST00000120829 1007 ntBASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Gm8318-201ENSMUST00000182954 872 ntBASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 AC159896.2-201ENSMUST00000214753 269 ntBASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 AC154319.1-201ENSMUST00000216330 312 ntBASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 AL589735.1-201ENSMUST00000224353 270 ntBASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 AC159006.1-201ENSMUST00000226396 258 ntBASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.41■□□□□ 0.7
Ccdc6D3YZP9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Gm8096-201ENSMUST00000209921 1591 ntBASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Rarb-207ENSMUST00000225921 2756 ntBASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Gm27920-201ENSMUST00000183953 96 ntBASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Gm7619-201ENSMUST00000210649 1282 ntBASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc6D3YZP9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
Ccdc6D3YZP9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Ccdc6D3YZP9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc6D3YZP9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Olfr582-201ENSMUST00000098212 960 ntBASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc6D3YZP9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 Gm5566-201ENSMUST00000116118 459 ntBASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 Gm9719-201ENSMUST00000162765 543 ntBASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 Gm10478-201ENSMUST00000084451 396 ntBASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc6D3YZP9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms