Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhgb8A0A140LI48 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhgb8A0A140LI48 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm44450-201ENSMUST00000199528 114 ntBASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhgb8A0A140LI48 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhgb8A0A140LI48 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm28033-201ENSMUST00000184224 96 ntBASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm27741-201ENSMUST00000185060 237 ntBASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhgb8A0A140LI48 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms