Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Gm44729-201ENSMUST00000206759 2052 ntBASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-4A0A075B654 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Gm10138-203ENSMUST00000206952 366 ntBASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Gm43034-201ENSMUST00000198678 1364 ntBASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3-4A0A075B654 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3-4A0A075B654 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms