Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Q9CR55 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Q9CR55 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q9CR55 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q9CR55 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Q9CR55 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q9CR55 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.92■□□□□ 0.94
Q9CR55 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q9CR55 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q9CR55 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q9CR55 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
Q9CR55 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Q9CR55 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q9CR55 Peli2-204ENSMUST00000226513 1320 ntBASIC20.89■□□□□ 0.93
Q9CR55 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CR55 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CR55 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CR55 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CR55 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CR55 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Q9CR55 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.86■□□□□ 0.93
Q9CR55 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9CR55 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Q9CR55 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Q9CR55 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.86■□□□□ 0.93
Q9CR55 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Q9CR55 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.85■□□□□ 0.93
Q9CR55 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q9CR55 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CR55 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Q9CR55 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q9CR55 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Q9CR55 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Q9CR55 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q9CR55 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.82■□□□□ 0.92
Q9CR55 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CR55 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CR55 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CR55 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CR55 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CR55 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CR55 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CR55 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CR55 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CR55 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CR55 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Q9CR55 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CR55 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CR55 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.8■□□□□ 0.92
Q9CR55 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CR55 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CR55 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CR55 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CR55 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CR55 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CR55 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Q9CR55 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q9CR55 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q9CR55 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.78■□□□□ 0.92
Q9CR55 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Q9CR55 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.77■□□□□ 0.92
Q9CR55 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q9CR55 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q9CR55 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Q9CR55 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q9CR55 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Q9CR55 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q9CR55 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q9CR55 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q9CR55 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Q9CR55 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CR55 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CR55 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Q9CR55 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CR55 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CR55 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CR55 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CR55 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CR55 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Q9CR55 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CR55 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CR55 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q9CR55 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Q9CR55 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Q9CR55 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q9CR55 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Q9CR55 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q9CR55 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q9CR55 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q9CR55 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.73■□□□□ 0.91
Q9CR55 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q9CR55 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CR55 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CR55 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Q9CR55 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CR55 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Q9CR55 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q9CR55 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.71■□□□□ 0.91
Q9CR55 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q9CR55 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms