Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf1bP25119 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf1bP25119 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf1bP25119 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.03■□□□□ 0.96
Tnfrsf1bP25119 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.03■□□□□ 0.96
Tnfrsf1bP25119 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf1bP25119 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Tnfrsf1bP25119 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf1bP25119 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf1bP25119 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf1bP25119 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf1bP25119 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf1bP25119 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Tnfrsf1bP25119 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Tnfrsf1bP25119 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf1bP25119 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf1bP25119 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf1bP25119 Gm9806-201ENSMUST00000051080 552 ntBASIC21.01■□□□□ 0.95
Tnfrsf1bP25119 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf1bP25119 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf1bP25119 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21■□□□□ 0.95
Tnfrsf1bP25119 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Tnfrsf1bP25119 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnfrsf1bP25119 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf1bP25119 Gm11175-201ENSMUST00000116172 543 ntBASIC20.99■□□□□ 0.95
Tnfrsf1bP25119 Gm16437-201ENSMUST00000025669 507 ntBASIC20.99■□□□□ 0.95
Tnfrsf1bP25119 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.99■□□□□ 0.95
Tnfrsf1bP25119 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf1bP25119 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf1bP25119 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf1bP25119 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf1bP25119 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf1bP25119 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.98■□□□□ 0.95
Tnfrsf1bP25119 Terc-201ENSMUST00000082862 423 ntBASIC20.98■□□□□ 0.95
Tnfrsf1bP25119 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf1bP25119 Gm11687-201ENSMUST00000118911 886 ntBASIC20.97■□□□□ 0.95
Tnfrsf1bP25119 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf1bP25119 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf1bP25119 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf1bP25119 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.97■□□□□ 0.95
Tnfrsf1bP25119 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf1bP25119 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf1bP25119 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf1bP25119 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf1bP25119 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf1bP25119 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf1bP25119 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.95■□□□□ 0.95
Tnfrsf1bP25119 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf1bP25119 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf1bP25119 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Tnfrsf1bP25119 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf1bP25119 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf1bP25119 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf1bP25119 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Tnfrsf1bP25119 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfrsf1bP25119 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfrsf1bP25119 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfrsf1bP25119 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfrsf1bP25119 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfrsf1bP25119 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnfrsf1bP25119 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tnfrsf1bP25119 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tnfrsf1bP25119 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnfrsf1bP25119 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfrsf1bP25119 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfrsf1bP25119 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.91■□□□□ 0.94
Tnfrsf1bP25119 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.91■□□□□ 0.94
Tnfrsf1bP25119 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.91■□□□□ 0.94
Tnfrsf1bP25119 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.91■□□□□ 0.94
Tnfrsf1bP25119 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tnfrsf1bP25119 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf1bP25119 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf1bP25119 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.89■□□□□ 0.93
Tnfrsf1bP25119 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tnfrsf1bP25119 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Tnfrsf1bP25119 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tnfrsf1bP25119 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfrsf1bP25119 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Tnfrsf1bP25119 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tnfrsf1bP25119 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
Tnfrsf1bP25119 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfrsf1bP25119 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf1bP25119 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf1bP25119 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.87■□□□□ 0.93
Tnfrsf1bP25119 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf1bP25119 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf1bP25119 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf1bP25119 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf1bP25119 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf1bP25119 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf1bP25119 Mir6538-201ENSMUST00000183713 110 ntBASIC20.86■□□□□ 0.93
Tnfrsf1bP25119 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf1bP25119 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Tnfrsf1bP25119 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf1bP25119 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Tnfrsf1bP25119 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf1bP25119 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf1bP25119 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
Tnfrsf1bP25119 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf1bP25119 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms