Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Gm44454-201ENSMUST00000198541 138 ntBASIC15.18■□□□□ 0.02
Cdh17Q9R100 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.18■□□□□ 0.02
Cdh17Q9R100 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.18■□□□□ 0.02
Cdh17Q9R100 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Gm27742-201ENSMUST00000184667 60 ntBASIC15.17■□□□□ 0.02
Cdh17Q9R100 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh17Q9R100 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Cdh17Q9R100 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdh17Q9R100 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms