Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr2e3Q9QXZ7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr2e3Q9QXZ7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr2e3Q9QXZ7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nr2e3Q9QXZ7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr2e3Q9QXZ7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 AV026068-213ENSMUST00000223675 1171 ntBASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nr2e3Q9QXZ7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Gm2651-201ENSMUST00000203560 838 ntBASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nr2e3Q9QXZ7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms