Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Shroom3Q9QXN0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.58■□□□□ 0.08
Shroom3Q9QXN0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom3Q9QXN0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom3Q9QXN0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom3Q9QXN0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom3Q9QXN0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.58■□□□□ 0.08
Shroom3Q9QXN0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom3Q9QXN0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Gm2213-201ENSMUST00000197485 688 ntBASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.57■□□□□ 0.08
Shroom3Q9QXN0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Gm23935-201ENSMUST00000102303 57 ntBASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Gm24270-201ENSMUST00000102326 57 ntBASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Gm14722-201ENSMUST00000118943 689 ntBASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Gm24245-201ENSMUST00000157318 57 ntBASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Gm2756-201ENSMUST00000195851 400 ntBASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 AV026068-213ENSMUST00000223675 1171 ntBASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shroom3Q9QXN0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shroom3Q9QXN0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms