Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Gm7367-201ENSMUST00000057611 492 ntBASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm4Q9QXA5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm4Q9QXA5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm4Q9QXA5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm4Q9QXA5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Lsm4Q9QXA5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm4Q9QXA5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm4Q9QXA5 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm4Q9QXA5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm4Q9QXA5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm4Q9QXA5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm4Q9QXA5 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm4Q9QXA5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms