Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16■□□□□ 0.15
Msh5Q9QUM7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Msh5Q9QUM7 Gm14201-201ENSMUST00000117627 289 ntBASIC16■□□□□ 0.15
Msh5Q9QUM7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16■□□□□ 0.15
Msh5Q9QUM7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16■□□□□ 0.15
Msh5Q9QUM7 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC16■□□□□ 0.15
Msh5Q9QUM7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16■□□□□ 0.15
Msh5Q9QUM7 AC160962.2-201ENSMUST00000224761 632 ntBASIC16■□□□□ 0.15
Msh5Q9QUM7 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Msh5Q9QUM7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh5Q9QUM7 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Msh5Q9QUM7 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Msh5Q9QUM7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Msh5Q9QUM7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Msh5Q9QUM7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh5Q9QUM7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Msh5Q9QUM7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16■□□□□ 0.15
Msh5Q9QUM7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Msh5Q9QUM7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh5Q9QUM7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh5Q9QUM7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Gm22709-201ENSMUST00000116893 111 ntBASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Gm14579-201ENSMUST00000117068 283 ntBASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Gm10052-201ENSMUST00000168019 960 ntBASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.98■□□□□ 0.15
Msh5Q9QUM7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Gm7729-201ENSMUST00000050143 801 ntBASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh5Q9QUM7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Gm33142-201ENSMUST00000193913 867 ntBASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh5Q9QUM7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms