Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Gm6089-201ENSMUST00000197666 938 ntBASIC14.11□□□□□ -0.15
Ldb3Q9JKS4 Gm5864-201ENSMUST00000202263 970 ntBASIC14.11□□□□□ -0.15
Ldb3Q9JKS4 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.11□□□□□ -0.15
Ldb3Q9JKS4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Ldb3Q9JKS4 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.11□□□□□ -0.15
Ldb3Q9JKS4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb3Q9JKS4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb3Q9JKS4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb3Q9JKS4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ldb3Q9JKS4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb3Q9JKS4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ldb3Q9JKS4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb3Q9JKS4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Gm7862-201ENSMUST00000121461 292 ntBASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Ldb3Q9JKS4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Gm14722-201ENSMUST00000118943 689 ntBASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Gm28659-201ENSMUST00000188013 759 ntBASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb3Q9JKS4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ldb3Q9JKS4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ldb3Q9JKS4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ldb3Q9JKS4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Gm27741-201ENSMUST00000185060 237 ntBASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb3Q9JKS4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms