Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.2■□□□□ 0.02
Rrp8Q9DB85 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Gm11745-201ENSMUST00000121669 448 ntBASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Rprl2-201ENSMUST00000157150 290 ntBASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rrp8Q9DB85 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Haglr-201ENSMUST00000100000 2085 ntBASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rrp8Q9DB85 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rrp8Q9DB85 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms