Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2af1Q9D883 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2af1Q9D883 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2af1Q9D883 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
U2af1Q9D883 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2af1Q9D883 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2af1Q9D883 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
U2af1Q9D883 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
U2af1Q9D883 Gm14140-201ENSMUST00000119999 995 ntBASIC20.43■□□□□ 0.86
U2af1Q9D883 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.43■□□□□ 0.86
U2af1Q9D883 Gm18489-201ENSMUST00000172565 551 ntBASIC20.43■□□□□ 0.86
U2af1Q9D883 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.43■□□□□ 0.86
U2af1Q9D883 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.43■□□□□ 0.86
U2af1Q9D883 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2af1Q9D883 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
U2af1Q9D883 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
U2af1Q9D883 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2af1Q9D883 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2af1Q9D883 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
U2af1Q9D883 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.43■□□□□ 0.86
U2af1Q9D883 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2af1Q9D883 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2af1Q9D883 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2af1Q9D883 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2af1Q9D883 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.42■□□□□ 0.86
U2af1Q9D883 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.42■□□□□ 0.86
U2af1Q9D883 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.42■□□□□ 0.86
U2af1Q9D883 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.42■□□□□ 0.86
U2af1Q9D883 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2af1Q9D883 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2af1Q9D883 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC20.42■□□□□ 0.86
U2af1Q9D883 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC20.42■□□□□ 0.86
U2af1Q9D883 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2af1Q9D883 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2af1Q9D883 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
U2af1Q9D883 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
U2af1Q9D883 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2af1Q9D883 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2af1Q9D883 Prob1-201ENSMUST00000097619 3021 ntBASIC20.42■□□□□ 0.86
U2af1Q9D883 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2af1Q9D883 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
U2af1Q9D883 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC20.41■□□□□ 0.86
U2af1Q9D883 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1Q9D883 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1Q9D883 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1Q9D883 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
U2af1Q9D883 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
U2af1Q9D883 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1Q9D883 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.41■□□□□ 0.86
U2af1Q9D883 AC160980.1-201ENSMUST00000224136 970 ntBASIC20.41■□□□□ 0.86
U2af1Q9D883 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
U2af1Q9D883 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1Q9D883 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1Q9D883 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
U2af1Q9D883 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1Q9D883 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1Q9D883 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1Q9D883 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1Q9D883 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.41■□□□□ 0.86
U2af1Q9D883 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1Q9D883 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1Q9D883 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1Q9D883 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1Q9D883 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
U2af1Q9D883 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1Q9D883 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC20.4■□□□□ 0.86
U2af1Q9D883 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1Q9D883 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
U2af1Q9D883 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.4■□□□□ 0.86
U2af1Q9D883 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1Q9D883 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1Q9D883 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1Q9D883 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.4■□□□□ 0.86
U2af1Q9D883 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1Q9D883 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1Q9D883 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.4■□□□□ 0.86
U2af1Q9D883 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1Q9D883 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC20.4■□□□□ 0.86
U2af1Q9D883 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1Q9D883 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1Q9D883 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1Q9D883 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
U2af1Q9D883 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
U2af1Q9D883 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.39■□□□□ 0.86
U2af1Q9D883 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC20.39■□□□□ 0.86
U2af1Q9D883 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2af1Q9D883 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.39■□□□□ 0.85
U2af1Q9D883 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.39■□□□□ 0.85
U2af1Q9D883 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
U2af1Q9D883 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.39■□□□□ 0.85
U2af1Q9D883 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.39■□□□□ 0.85
U2af1Q9D883 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
U2af1Q9D883 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2af1Q9D883 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2af1Q9D883 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
U2af1Q9D883 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2af1Q9D883 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2af1Q9D883 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2af1Q9D883 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2af1Q9D883 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms