Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Gm6550-201ENSMUST00000187574 993 ntBASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Vps28Q9D1C8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Gm7222-201ENSMUST00000117512 906 ntBASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Gm27646-201ENSMUST00000183989 110 ntBASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps28Q9D1C8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.91■□□□□ 0.14
Vps28Q9D1C8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps28Q9D1C8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Mir5126-201ENSMUST00000175513 77 ntBASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Gm19164-201ENSMUST00000210667 640 ntBASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
Vps28Q9D1C8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms