Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Gm10566-201ENSMUST00000086739 996 ntBASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Mir6982-201ENSMUST00000184354 68 ntBASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Gm7213-201ENSMUST00000215977 950 ntBASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim13Q9CYB0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim13Q9CYB0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Gm2274-201ENSMUST00000184539 609 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms