Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trim16Q99PP9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Gm10819-201ENSMUST00000099988 561 ntBASIC15.23■□□□□ 0.03
Trim16Q99PP9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim16Q99PP9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim16Q99PP9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.21■□□□□ 0.03
Trim16Q99PP9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Gm18669-201ENSMUST00000216049 778 ntBASIC15.21■□□□□ 0.03
Trim16Q99PP9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim16Q99PP9 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.21■□□□□ 0.03
Trim16Q99PP9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim16Q99PP9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trim16Q99PP9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trim16Q99PP9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trim16Q99PP9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
Trim16Q99PP9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
Trim16Q99PP9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms