Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trim33Q99PP7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim33Q99PP7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.43■□□□□ 0.06
Trim33Q99PP7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Gm24589-201ENSMUST00000116692 94 ntBASIC15.43■□□□□ 0.06
Trim33Q99PP7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.43■□□□□ 0.06
Trim33Q99PP7 Gm7506-201ENSMUST00000207758 815 ntBASIC15.43■□□□□ 0.06
Trim33Q99PP7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.43■□□□□ 0.06
Trim33Q99PP7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trim33Q99PP7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.42■□□□□ 0.06
Trim33Q99PP7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Gm6257-201ENSMUST00000163864 910 ntBASIC15.42■□□□□ 0.06
Trim33Q99PP7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Birc2-201ENSMUST00000054878 378 ntBASIC15.42■□□□□ 0.06
Trim33Q99PP7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.42■□□□□ 0.06
Trim33Q99PP7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim33Q99PP7 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.42■□□□□ 0.06
Trim33Q99PP7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim33Q99PP7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms