Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Rpph1-201ENSMUST00000175096 319 ntBASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Mir6990-201ENSMUST00000183724 91 ntBASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim34aQ99PP6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Gm18889-201ENSMUST00000174284 929 ntBASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim34aQ99PP6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Gm16198-201ENSMUST00000118766 670 ntBASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Gm10499-201ENSMUST00000174094 934 ntBASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim34aQ99PP6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim34aQ99PP6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim34aQ99PP6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim34aQ99PP6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim34aQ99PP6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim34aQ99PP6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim34aQ99PP6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim34aQ99PP6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Trim34aQ99PP6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim34aQ99PP6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trim34aQ99PP6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim34aQ99PP6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim34aQ99PP6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim34aQ99PP6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim34aQ99PP6 Gm9385-201ENSMUST00000117563 472 ntBASIC19.08■□□□□ 0.64
Trim34aQ99PP6 AA543401-201ENSMUST00000164248 1269 ntBASIC19.08■□□□□ 0.64
Trim34aQ99PP6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trim34aQ99PP6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trim34aQ99PP6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim34aQ99PP6 Gm43474-201ENSMUST00000196415 774 ntBASIC19.08■□□□□ 0.64
Trim34aQ99PP6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim34aQ99PP6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.08■□□□□ 0.64
Trim34aQ99PP6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim34aQ99PP6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trim34aQ99PP6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Trim34aQ99PP6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim34aQ99PP6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim34aQ99PP6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Trim34aQ99PP6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms