Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SncaipQ99ME3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm7153-201ENSMUST00000117092 455 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm44357-201ENSMUST00000195897 142 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm19658-201ENSMUST00000196231 138 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm44367-201ENSMUST00000196836 138 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm44350-201ENSMUST00000197197 138 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm44390-201ENSMUST00000197533 144 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm44313-201ENSMUST00000198018 138 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm44486-201ENSMUST00000198508 138 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm44314-201ENSMUST00000199263 138 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm44394-201ENSMUST00000199558 138 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm44484-201ENSMUST00000199873 138 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm44466-201ENSMUST00000200264 138 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm44359-201ENSMUST00000200671 138 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.09■□□□□ 0.17
SncaipQ99ME3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.09■□□□□ 0.17
SncaipQ99ME3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaipQ99ME3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaipQ99ME3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.09■□□□□ 0.17
SncaipQ99ME3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SncaipQ99ME3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.08■□□□□ 0.17
SncaipQ99ME3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SncaipQ99ME3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SncaipQ99ME3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SncaipQ99ME3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SncaipQ99ME3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SncaipQ99ME3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SncaipQ99ME3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Gm27459-201ENSMUST00000184860 107 ntBASIC16.08■□□□□ 0.16
SncaipQ99ME3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaipQ99ME3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SncaipQ99ME3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Gm43347-201ENSMUST00000200226 580 ntBASIC16.07■□□□□ 0.16
SncaipQ99ME3 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.07■□□□□ 0.16
SncaipQ99ME3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaipQ99ME3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SncaipQ99ME3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SncaipQ99ME3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SncaipQ99ME3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SncaipQ99ME3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SncaipQ99ME3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.06■□□□□ 0.16
SncaipQ99ME3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SncaipQ99ME3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SncaipQ99ME3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.06■□□□□ 0.16
SncaipQ99ME3 Sybu-209ENSMUST00000228639 4113 ntBASIC16.06■□□□□ 0.16
SncaipQ99ME3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.06■□□□□ 0.16
SncaipQ99ME3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SncaipQ99ME3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SncaipQ99ME3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms