Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.15■□□□□ 0.66
RtcbQ99LF4 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.15■□□□□ 0.66
RtcbQ99LF4 Mir8102-201ENSMUST00000184148 139 ntBASIC19.15■□□□□ 0.66
RtcbQ99LF4 Gm17837-201ENSMUST00000186435 985 ntBASIC19.15■□□□□ 0.66
RtcbQ99LF4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.15■□□□□ 0.66
RtcbQ99LF4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RtcbQ99LF4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RtcbQ99LF4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RtcbQ99LF4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RtcbQ99LF4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.15■□□□□ 0.66
RtcbQ99LF4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RtcbQ99LF4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RtcbQ99LF4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
RtcbQ99LF4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RtcbQ99LF4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RtcbQ99LF4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
RtcbQ99LF4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RtcbQ99LF4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RtcbQ99LF4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RtcbQ99LF4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RtcbQ99LF4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.14■□□□□ 0.66
RtcbQ99LF4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.14■□□□□ 0.65
RtcbQ99LF4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RtcbQ99LF4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RtcbQ99LF4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC19.14■□□□□ 0.65
RtcbQ99LF4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RtcbQ99LF4 Gm27989-201ENSMUST00000184721 107 ntBASIC19.14■□□□□ 0.65
RtcbQ99LF4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.14■□□□□ 0.65
RtcbQ99LF4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RtcbQ99LF4 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.14■□□□□ 0.65
RtcbQ99LF4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RtcbQ99LF4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RtcbQ99LF4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RtcbQ99LF4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RtcbQ99LF4 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RtcbQ99LF4 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.14■□□□□ 0.65
RtcbQ99LF4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RtcbQ99LF4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RtcbQ99LF4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RtcbQ99LF4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
RtcbQ99LF4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RtcbQ99LF4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RtcbQ99LF4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.13■□□□□ 0.65
RtcbQ99LF4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC19.13■□□□□ 0.65
RtcbQ99LF4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.13■□□□□ 0.65
RtcbQ99LF4 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RtcbQ99LF4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RtcbQ99LF4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RtcbQ99LF4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RtcbQ99LF4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RtcbQ99LF4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RtcbQ99LF4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
RtcbQ99LF4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.12■□□□□ 0.65
RtcbQ99LF4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Gm2810-201ENSMUST00000118681 990 ntBASIC19.12■□□□□ 0.65
RtcbQ99LF4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Gm18737-201ENSMUST00000173594 937 ntBASIC19.12■□□□□ 0.65
RtcbQ99LF4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Gm38294-201ENSMUST00000192831 381 ntBASIC19.12■□□□□ 0.65
RtcbQ99LF4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RtcbQ99LF4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RtcbQ99LF4 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.11■□□□□ 0.65
RtcbQ99LF4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RtcbQ99LF4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RtcbQ99LF4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RtcbQ99LF4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RtcbQ99LF4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RtcbQ99LF4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RtcbQ99LF4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RtcbQ99LF4 Gm13823-201ENSMUST00000119930 345 ntBASIC19.11■□□□□ 0.65
RtcbQ99LF4 Gm11543-201ENSMUST00000120758 370 ntBASIC19.11■□□□□ 0.65
RtcbQ99LF4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC19.11■□□□□ 0.65
RtcbQ99LF4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.11■□□□□ 0.65
RtcbQ99LF4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.11■□□□□ 0.65
RtcbQ99LF4 Gm9824-201ENSMUST00000178707 561 ntBASIC19.11■□□□□ 0.65
RtcbQ99LF4 Gm2423-201ENSMUST00000074863 733 ntBASIC19.11■□□□□ 0.65
RtcbQ99LF4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RtcbQ99LF4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RtcbQ99LF4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.11■□□□□ 0.65
RtcbQ99LF4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RtcbQ99LF4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms