Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm4535-201ENSMUST00000182274 558 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm8825-201ENSMUST00000182565 998 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm4518-201ENSMUST00000182638 718 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm10355-201ENSMUST00000097146 517 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Mzt1-203ENSMUST00000227948 952 ntBASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha3Q91Y16 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm11452-201ENSMUST00000122376 690 ntBASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm44357-201ENSMUST00000195897 142 ntBASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm19658-201ENSMUST00000196231 138 ntBASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm44367-201ENSMUST00000196836 138 ntBASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm44350-201ENSMUST00000197197 138 ntBASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm44390-201ENSMUST00000197533 144 ntBASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm44313-201ENSMUST00000198018 138 ntBASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm44486-201ENSMUST00000198508 138 ntBASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm44314-201ENSMUST00000199263 138 ntBASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm44394-201ENSMUST00000199558 138 ntBASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm44484-201ENSMUST00000199873 138 ntBASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm44466-201ENSMUST00000200264 138 ntBASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Gm44359-201ENSMUST00000200671 138 ntBASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha3Q91Y16 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms