Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb1Q91Y08 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb1Q91Y08 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb1Q91Y08 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Pcdhb1Q91Y08 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhb1Q91Y08 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms