Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb8Q91XZ2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb8Q91XZ2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb8Q91XZ2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb8Q91XZ2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb8Q91XZ2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Pcdhb8Q91XZ2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb8Q91XZ2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb8Q91XZ2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm8825-201ENSMUST00000182565 998 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm4518-201ENSMUST00000182638 718 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb8Q91XZ2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Gm25745-201ENSMUST00000174945 133 ntBASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Gm27867-201ENSMUST00000184778 125 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms