Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga11Q91XY8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga11Q91XY8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdhga11Q91XY8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga11Q91XY8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga11Q91XY8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga11Q91XY8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.05■□□□□ -0
Pcdhga11Q91XY8 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Rprl3-201ENSMUST00000157400 290 ntBASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga11Q91XY8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Gm27741-201ENSMUST00000185060 237 ntBASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga11Q91XY8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Asic1-205ENSMUST00000228185 1818 ntBASIC15.02■□□□□ -0
Pcdhga11Q91XY8 App-207ENSMUST00000227737 2827 ntBASIC15.02■□□□□ -0
Pcdhga11Q91XY8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Gm25406-201ENSMUST00000157599 105 ntBASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga11Q91XY8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga11Q91XY8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga11Q91XY8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdhga11Q91XY8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga11Q91XY8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga11Q91XY8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga11Q91XY8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga11Q91XY8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms