Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga3Q91XY5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Pcdhga3Q91XY5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Rprl3-201ENSMUST00000157400 290 ntBASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Mir6404-201ENSMUST00000183699 94 ntBASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga3Q91XY5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhga3Q91XY5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Mir3081-201ENSMUST00000175305 84 ntBASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhga3Q91XY5 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.86□□□□□ -0.19
Pcdhga3Q91XY5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms